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site_name: Microsoft Biodiversity
site_url: https://microsoft.github.io/Biodiversity/
site_description: "PyTorch-Wildlife — open-source AI for camera traps, bioacoustics, and wildlife monitoring. Includes MegaDetector, MegaDetector-Acoustic, MegaDetector-Overhead, and SPARROW Studio."
docs_dir: docs
site_dir: site
repo_url: https://github.com/microsoft/Biodiversity
repo_name: microsoft/Biodiversity
copyright: Copyright (c) 2023 Microsoft Corporation
theme:
name: material
favicon: https://zenodo.org/records/15376499/files/cat.png
logo: https://zenodo.org/records/15376499/files/cat.png
icon:
menu: material/menu
alternate: material/translate
search: material/magnify
share: material/share-variant
close: material/close
top: material/arrow-up
edit: material/pencil
view: material/eye
repo: fontawesome/brands/git-alt
admonition:
note: material/note
abstract: material/lightbulb
info: material/information
tip: material/lightbulb-on
success: material/check-circle
question: material/help-circle
warning: material/alert
failure: material/alert-circle
danger: material/alert-octagon
bug: material/bug
example: material/format-list-bulleted
quote: material/format-quote-open
tag:
default: material/tag
info: material/information
warning: material/alert
danger: material/alert-octagon
previous: material/arrow-left
next: material/arrow-right
palette:
- media: "(prefers-color-scheme: light)"
scheme: default
primary: green
accent: deep orange
toggle:
icon: material/paw-off
name: Switch to dark mode
- media: "(prefers-color-scheme: dark)"
scheme: slate
primary: teal
accent: deep orange
toggle:
icon: material/paw
name: Switch to light mode
features:
- navigation.tracking
- navigation.tabs
- navigation.sections
- navigation.path
- toc.follow
# - toc.integrate
- navigation.top
- search.suggest
- search.share
- navigation.footer
nav:
- PyTorch-Wildlife:
- Overview: index.md
- Core Features: core_features.md
- MegaDetector: megadetector.md
- MegaDetector-Acoustic: bioacoustics.md
- Installation: installation.md
- Tags: tags.md
- Existing Collaborators: collaborators.md
- Contributors: contributors.md
- Cite Us: cite.md
- What's New?:
- Latest Release: releases/release_notes.md
- Past Releases: releases/past_releases.md
- PW-Engine Preview: pw_engine_overview.md
- Model Zoo:
- MegaDetector: model_zoo/megadetector.md
- Other Detectors: model_zoo/other_detectors.md
- Classifiers: model_zoo/classifiers.md
- Bioacoustics: model_zoo/bioacoustics.md
- Demo and UI:
- Demo Data: demo_and_ui/demo_data.md
- Notebook: demo_and_ui/notebook.md
- Gradio App: demo_and_ui/gradio.md
- AddaxAI (formerly known as EcoAssist): demo_and_ui/ecoassist.md
- TimeLapse: demo_and_ui/timelapse.md
- Contribute:
- Contribute Guidelines: contribute.md
- License: license.md
- Developer Guide: build_mkdocs.md
- Reference - Code API:
- Base Module:
- Overview: base/overview.md
- Data:
- Datasets: base/data/datasets.md
- Transforms: base/data/transforms.md
- Models:
- Classification:
- Base Classifier:
- base/models/classification/base_classifier.md
- ResNet Base:
- base/models/classification/resnet_base/base_classifier.md
- base/models/classification/resnet_base/amazon.md
- base/models/classification/resnet_base/custom_weights.md
- base/models/classification/resnet_base/opossum.md
- base/models/classification/resnet_base/serengeti.md
- TIMM Base:
- base/models/classification/timm_base/base_classifier.md
- base/models/classification/timm_base/DFNE.md
- base/models/classification/timm_base/Deepfaune.md
- Detection:
- Base Detector:
- base/models/detection/base_detector.md
- HerdNet:
- base/models/detection/herdnet.md
- base/models/detection/herdnet/dla.md
- base/models/detection/herdnet/model.md
- Animaloc:
- Data:
- base/models/detection/herdnet/animaloc/data/patches.md
- base/models/detection/herdnet/animaloc/data/types.md
- Eval:
- base/models/detection/herdnet/animaloc/eval/lmds.md
- base/models/detection/herdnet/animaloc/eval/stitchers.md
- Ultralytics Based:
- base/models/detection/ultralytics_based/Deepfaune.md
- MegaDetector v5:
- base/models/detection/ultralytics_based/megadetectorv5.md
- MegaDetector v6:
- base/models/detection/ultralytics_based/megadetectorv6.md
- base/models/detection/ultralytics_based/megadetectorv6_distributed.md
- YOLOv5 Base:
- base/models/detection/ultralytics_based/yolov5_base.md
- YOLOv8 Base:
- base/models/detection/ultralytics_based/yolov8_base.md
- YOLOv8 Distributed:
- base/models/detection/ultralytics_based/yolov8_distributed.md
- Utils:
- base/utils/misc.md
- base/utils/post_process.md
- Model Fine-tuning:
- Overview: fine_tuning_modules/overview.md
- Classification Fine-tuning:
- Overview: fine_tuning_modules/classification/overview.md
- Detection Fine-tuning:
- Overview: fine_tuning_modules/detection/overview.md
markdown_extensions:
- admonition
- pymdownx.details
- pymdownx.superfences
- md_in_html
- attr_list
- sane_lists
- pymdownx.tabbed:
alternate_style: true
- toc:
permalink: true
- pymdownx.emoji:
emoji_index: !!python/name:material.extensions.emoji.twemoji
emoji_generator: !!python/name:material.extensions.emoji.to_svg
- pymdownx.snippets:
check_paths: true
- pymdownx.highlight:
anchor_linenums: true
line_spans: __span
pygments_lang_class: true
plugins:
- search
- meta
- tags
- mkdocstrings:
handlers:
python:
options:
docstring_style: google