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mlst
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Collection of scripts for bacterial genomics
science unix opensource bioinformatics annotation genomics perl ngs sequencing computational-biology microbial-genomics blast microbiology mlst bioperl scripts-collection
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Updated
Dec 6, 2019 - Perl
🧬 Analyze *Escherichia coli* strains efficiently with EcoliTyper, a unified tool for MLST, serotyping, and Clermont phylotyping in one workflow.
bioinformatics computational-biology public-health epidemiology microbial-genomics mlst ecoli escherichia-coli cge serotyping genotyping outbreak-investigation pathogen-surveillance strain-typing clermont-typing
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Updated
May 15, 2026 - Perl
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