Natural Language Search and Analysis of High Dimensional Genomic Data
I am sharing my code repository to understand the working and principle of working of various BioInformatics code in Python
Predicting regulatory DNA elements based on epigenomic signatures
This project aims on making the algorithms covered in the corresponding lecture at LMU Munich easier to understand by providing step-by-step logging and result visualization.
RNA Backbone Torsion and Pseudotorsion Angle Prediction using Dilated Convolutional Neural Networks
ΠΡΠΎΡΡΡΠ΅ Π±ΠΈΠΎΠΈΠ½ΡΠΎΡΠΌΠ°ΡΠΈΡΠ΅ΡΠΊΠΈΠ΅ ΡΠΊΡΠΈΠΏΡΡ Π½Π° Python 3. Π£Π΄ΠΎΠ±Π½Π°Ρ ΠΈ Π³ΠΈΠ±ΠΊΠ°Ρ Π·Π°ΠΌΠ΅Π½Π° Excel/Calc Π΄Π»Ρ ΡΠ΅ΡΠ΅Π½ΠΈΡ ΠΏΠΎΠ²ΡΠ΅Π΄Π½Π΅Π²Π½ΡΡ ΡΡΡΠΈΠ½Π½ΡΡ Π·Π°Π΄Π°Ρ Π²ΡΡΠΈΡΠ»ΠΈΡΠ΅Π»ΡΠ½ΠΎΠΉ Π±ΠΈΠΎΠ»ΠΎΠ³ΠΈΠΈ.
General bioinformatics functions in Python
Finding Hidden Messages in DNA
implementation of BurrowsβWheeler transform on a Gene Sequence - Bioinformatics Course - Fall 2019
Implementation of three algorithms to solve the motif finding problem.
PyPairs - A python scRNA-Seq classifier
SCGid, a consensus approach to contig filtering and genome prediction from single-cell sequencing libraries
Local, Semi-Global and Global Alignment for Protein Sequences
coding problems from course 6 of the Bioinformatics specialization
My solutions for rosalind problems
Genome Sequencing
Python solutions to the ROSALIND (https://rosalind.info/) bioinformatics problem set.
𧬠Comprehensive ACMG/AMP variant classification tool implementing all 28 evidence criteria (2015 & 2023 guidelines). Interactive CLI with API integrations and automated reporting.
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